KEGG Metabolic Pathways with PRIAM versus annotation on S.meliloti

Graphical pathway maps

dark green: found by annotation and by matrices with score > of cutoff value
pale green: found by annotation and matrices with score < of cutoff value
red: found by annotation
orange: found by matrices with score > of cutoff value
yellow: found by matrices matrices with score < of cutoff value
blue: EC without sequences in ENZYME
purple: EC without sequences in ENZYME but found by annotation
white: no information


Carbohydrate Metabolism
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Galactose metabolism
Ascorbate and aldarate metabolism
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
Inositol metabolism
Energy Metabolism
Oxidative phosphorylation
ATP synthesis
Carbon fixation
Reductive carboxylate cycle (CO2 fixation)
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Lipid Metabolism
Fatty acid biosynthesis (path 1)
Fatty acid biosynthesis (path 2)
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Sterol biosynthesis
Bile acid biosynthesis
C21-Steroid hormone metabolism
Androgen and estrogen metabolism
Nucleotide Metabolism
Purine metabolism
Pyrimidine metabolism
Nucleotide sugars metabolism
Amino Acid Metabolism
Glutamate metabolism
Alanine and aspartate metabolism
Glycine, serine and threonine metabolism
Methionine metabolism
Cysteine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Lysine degradation
Arginine and proline metabolism
Histidine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Tryptophan metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Urea cycle and metabolism of amino groups
Metabolism of Other Amino Acids
beta-Alanine metabolism
Taurine and hypotaurine metabolism
Aminophosphonate metabolism
Selenoamino acid metabolism
Cyanoamino acid metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Glutathione metabolism
Metabolism of Complex Carbohydrates
Starch and sucrose metabolism
N-Glycans biosynthesis
O-Glycans biosynthesis
N-Glycan degradation
Aminosugars metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Glycosaminoglycan degradation
Chondroitin / heparan sulfate biosynthesis
Keratan sulfate biosynthesis
Metabolism of Complex Lipids
Glycerolipid metabolism
Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
Inositol phosphate metabolism
Sphingophospholipid biosynthesis
Phospholipid degradation
Sphingoglycolipid metabolism
Blood group glycolipid biosynthesis - lact series
Blood group glycolipid biosynthesis - neolact series
Globoside metabolism
Prostaglandin and leukotriene metabolism
Metabolism of Cofactors and Vitamins
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
One carbon pool by folate
Retinol metabolism
Porphyrin and chlorophyll metabolism
Ubiquinone biosynthesis
Biosynthesis of Secondary Metabolites
Terpenoid biosynthesis
Flavonoids, stilbene and lignin biosynthesis
Alkaloid biosynthesis I
Alkaloid biosynthesis II
Penicillins and cephalosporins biosynthesis
beta-Lactam resistance
Streptomycin biosynthesis
Erythromycin biosynthesis
Tetracycline biosynthesis
Clavulanic acid biosynthesis
Puromycin biosynthesis
Biodegradation of Xenobiotics
Caprolactam degradation
Biphenyl degradation
Toluene and xylene degradation
gamma-Hexachlorocyclohexane degradation
3-Chloroacrylic acid degradation
1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation
2,4-Dichlorobenzoate degradation
1,2-Dichloroethane degradation
Tetrachloroethene degradation
Styrene degradation
1,4-Dichlorobenzene degradation
Nitrobenzene degradation
Ethylbenzene degradation
Fluorene degradation
Carbazole degradation
Benzoate degradation via CoA ligation
Benzoate degradation via hydroxylation
Atrazine degradation

Last updated: Nov 21, 2002